From f8f2f075264b93bed508eb8486b904865abe0bdd Mon Sep 17 00:00:00 2001
From: Jaeyoung Chun <jaeyoung.chun@gmail.com>
Date: Thu, 11 Nov 2021 11:16:48 -0500
Subject: [PATCH] Add config for devtest

---
 configs/devtest.inputs.aws.json | 17 +++++++++++++++++
 configs/devtest.labels.aws.json |  9 +++++++++
 2 files changed, 26 insertions(+)
 create mode 100644 configs/devtest.inputs.aws.json
 create mode 100644 configs/devtest.labels.aws.json

diff --git a/configs/devtest.inputs.aws.json b/configs/devtest.inputs.aws.json
new file mode 100644
index 0000000..7d5e0f3
--- /dev/null
+++ b/configs/devtest.inputs.aws.json
@@ -0,0 +1,17 @@
+{
+    "CellRangerVdj.sampleName": "sc5p_v2_hs_B_1k_b",
+    "CellRangerVdj.fastqNames": "sc5p_v2_hs_B_1k_b",
+    "CellRangerVdj.referenceGenome": "GRCh38",
+    "CellRangerVdj.inputFastq": [
+        "s3://dp-lab-test/vdj/sc5p_v2_hs_B_1k_b_S1_L001_I1_001.fastq.gz",
+        "s3://dp-lab-test/vdj/sc5p_v2_hs_B_1k_b_S1_L001_I2_001.fastq.gz",
+        "s3://dp-lab-test/vdj/sc5p_v2_hs_B_1k_b_S1_L001_R1_001.fastq.gz",
+        "s3://dp-lab-test/vdj/sc5p_v2_hs_B_1k_b_S1_L001_R2_001.fastq.gz",
+        "s3://dp-lab-test/vdj/sc5p_v2_hs_B_1k_b_S1_L002_I1_001.fastq.gz",
+        "s3://dp-lab-test/vdj/sc5p_v2_hs_B_1k_b_S1_L002_I2_001.fastq.gz",
+        "s3://dp-lab-test/vdj/sc5p_v2_hs_B_1k_b_S1_L002_R1_001.fastq.gz",
+        "s3://dp-lab-test/vdj/sc5p_v2_hs_B_1k_b_S1_L002_R2_001.fastq.gz"
+    ],
+    "CellRangerVdj.chain": "auto",
+    "CellRangerVdj.dockerRegistry": "quay.io/hisplan"
+}
diff --git a/configs/devtest.labels.aws.json b/configs/devtest.labels.aws.json
new file mode 100644
index 0000000..bf0403c
--- /dev/null
+++ b/configs/devtest.labels.aws.json
@@ -0,0 +1,9 @@
+{
+    "pipelineType": "CellRangerVdj",
+    "project": "DEVTEST",
+    "sample": "Human B cells/Healthy Donor",
+    "owner": "chunj",
+    "destination": "s3://dp-lab-gwf-core/outputs/cr-vdj-results/",
+    "transfer": "skip",
+    "comment": ""
+}