config_insilico.yaml

device: 'cuda'  #'cpu' #
ch_gap: 1 # 16 #8 #4 #2 #
frame_batch_size: 2 #20 #1 #1 #10
enlarge_factor: 55 #55 #60 #
cluster_number: 64 #2 #4 #14 #32 #64 #8 #12 #2 #
comp_max: 8
max_iter: 2
wave_idx: 1 #1 #0
num_scale: 1e12 #1e6 #
tx_gaps: [1,2,4,6,8,10,12] #[1, 2, 3] #[1,2,4,6,8] #, [1, 2, 4, 6, 8, 10, 12] #
frame_num: Null
dat_start: 1 #6 #
dat_num: 16
intersect_method: 'gt'
phase_refinement_opt: True
radial_offset_method: 'off'
parity_opt: True
echo_threshold: 0.175 #0.0825 #0.15  #2 #0.15 #
dist_par_threshold: 0.5
shift_factor: 2.5e-5
tracking: Null #'hungarian'
gamma: .9
clutter_db: 0 #-50 #
noise_multi: 1 #4 #12 #8

logging: True
plt_comp_opt: False
plt_cluster_opt: False
plt_frame_opt: False
save_opt: True

data_path: PALA_data_InSilicoFlow/
invivo_path: Rat18_2D_InVivoBrain/
ubx_dir: /storage/homefs/ch21z139/PALA_dataset/${data_path}
loc_dir: /home/chris/LocalDatasets/03_PALA/${data_path}
map_dir: /home/chris/UbelixWorkspaces/artorg_aimi/ws_00000/chris/
data_dir: ${ubx_dir}