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Get value_shape from FunctionSpace #6172

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Get value_shape from FunctionSpace

Get value_shape from FunctionSpace #6172

GitHub Actions / Firedrake real failed Nov 12, 2024 in 0s

8096 tests run, 4635 passed, 673 skipped, 2788 failed.

Annotations

Check failure on line 218 in tests/vertexonly/test_interpolation_from_parent.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_interpolation_from_parent.test_vector_function_interpolation[squarequads-mesh-100-coords-FunctionSpace(RTCF2)] 

AttributeError: 'VectorElement' object has no attribute 'value_size'
Raw output 
self = Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38)
tolerance = 0.5

    def _c_locator(self, tolerance=None):
        from pyop2 import compilation
        from pyop2.utils import get_petsc_dir
        import firedrake.function as function
        import firedrake.pointquery_utils as pq_utils
    
        cache = self.__dict__.setdefault("_c_locator_cache", {})
        try:
>           return cache[tolerance]
E           KeyError: 0.5

firedrake/mesh.py:2651: KeyError

During handling of the above exception, another exception occurred:

parentmesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38)
vertexcoords = array([[ 0.59762701,  0.93037873],
       [ 0.70552675,  0.58976637],
       [ 0.3473096 ,  0.79178823],
       [ 0.37... 1.38874478],
       [ 0.97910159,  0.48091762],
       [-0.04517074,  0.00871296],
       [-0.38394168,  0.36883325]])
vfs = ('RTCF', 2, <cyfunction FunctionSpace at 0x7fa067fe06c0>)

    def test_vector_function_interpolation(parentmesh, vertexcoords, vfs):
        if parentmesh.name == "immersedsphere":
            vertexcoords = immersed_sphere_vertexcoords(parentmesh, vertexcoords)
        vfs_fam, vfs_deg, vfs_typ = vfs
>       vm = VertexOnlyMesh(parentmesh, vertexcoords, missing_points_behaviour=None)

tests/vertexonly/test_interpolation_from_parent.py:218: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/mesh.py:3364: in VertexOnlyMesh
    swarm, input_ordering_swarm, n_missing_points = _pic_swarm_in_mesh(
firedrake/mesh.py:3585: in _pic_swarm_in_mesh
    ) = _parent_mesh_embedding(
firedrake/mesh.py:4151: in _parent_mesh_embedding
    ) = parent_mesh.locate_cells_ref_coords_and_dists(coords_global, tolerance)
firedrake/mesh.py:2633: in locate_cells_ref_coords_and_dists
    self._c_locator(tolerance=tolerance)(self.coordinates._ctypes,
firedrake/mesh.py:2654: in _c_locator
    src = pq_utils.src_locate_cell(self, tolerance=tolerance)
firedrake/pointquery_utils.py:37: in src_locate_cell
    src.append(compile_coordinate_element(mesh.ufl_coordinate_element(), tolerance))
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:217: in compile_coordinate_element
    "to_reference_coords_newton_step": to_reference_coords_newton_step(ufl_coordinate_element, parameters),
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:147: in to_reference_coords_newton_step
    x0_expr = builder._coefficient(x0, "x0")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 40), VectorElement(FiniteElement('Real', quadrilateral, 0), dim=2)), 77)
name = 'x0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'VectorElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError

Check failure on line 82 in tests/regression/test_zero_forms.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_zero_forms.test_math_functions[True-tanh(f) + cos(f) + sin(f)-20-constant-scalar] 

AttributeError: 'FiniteElement' object has no attribute 'value_size'
Raw output 
mesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38)
expr = 'tanh(f) + cos(f) + sin(f)', value = 20, typ = 'constant'
fs_type = 'scalar'

    @pytest.mark.parametrize(['expr', 'value', 'typ', 'fs_type'],
                             itertools.product(['f',
                                                '2*f',
                                                'tanh(f)',
                                                '2 * tanh(f)',
                                                'f + tanh(f)',
                                                'cos(f) + sin(f)',
                                                'cos(f)*cos(f) + sin(f)*sin(f)',
                                                'tanh(f) + cos(f) + sin(f)',
                                                '1.0/tanh(f) + 1.0/f',
                                                'sqrt(f*f)',
                                                '1.0/tanh(sqrt(f*f)) + 1.0/f + sqrt(f*f)'],
                                               [1, 10, 20, -1, -10, -20],
                                               ['function', 'constant'],
                                               ['scalar', 'vector', 'tensor']))
    def test_math_functions(mesh, expr, value, typ, fs_type):
        if typ == 'function':
            family, degree = 'CG', 1
        elif typ == 'constant':
            family, degree = 'Real', 0
    
        if fs_type == "vector":
            V = VectorFunctionSpace(mesh, family, degree)
        elif fs_type == "tensor":
            V = TensorFunctionSpace(mesh, family, degree)
        else:
            V = FunctionSpace(mesh, family, degree)
        f = Function(V)
        f.assign(value)
        if fs_type == "vector":
            f = dot(f, f)
        elif fs_type == "tensor":
            f = inner(f, f)
    
>       actual = assemble(eval(expr)*dx)

tests/regression/test_zero_forms.py:82: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/adjoint_utils/assembly.py:30: in wrapper
    output = assemble(form, *args, **kwargs)
firedrake/assemble.py:133: in assemble
    return get_assembler(expr, *args, **kwargs).assemble(tensor=tensor)
firedrake/assemble.py:981: in assemble
    self.execute_parloops(tensor)
firedrake/assemble.py:1000: in execute_parloops
    for parloop in self.parloops(tensor):
firedrake/assemble.py:1011: in parloops
    self._parloops = tuple(parloop_builder.build(tensor) for parloop_builder in self.parloop_builders)
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1017: in parloop_builders
    for local_kernel, subdomain_id in self.local_kernels:
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1052: in local_kernels
    kernels = tsfc_interface.compile_form(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/tsfc_interface.py:220: in compile_form
    tsfc_kernel = TSFCKernel(
firedrake/tsfc_interface.py:95: in __init__
    tree = tsfc_compile_form(form, prefix=name, parameters=parameters,
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
../firedrake_venv/src/tsfc/tsfc/driver.py:74: in compile_form
    kernel = compile_integral(integral_data, fd, prefix, parameters, interface=interface, diagonal=diagonal, log=log)
../firedrake_venv/src/tsfc/tsfc/driver.py:128: in compile_integral
    builder.set_coefficients(integral_data, form_data)
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:345: in set_coefficients
    self._coefficient(coefficient, f"w_{k}")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38), FiniteElement('Real', quadrilateral, 0)), 0)
name = 'w_0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'FiniteElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError

Check failure on line 280 in tests/regression/test_function_spaces.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_function_spaces.test_reconstruct_component[dual-rt1] 

IndexError: tuple index out of range
Raw output 
space = 'rt1'
dg0 = WithGeometry(FunctionSpace(<firedrake.mesh.MeshTopology object at 0x7f47c876c3e0>, VectorElement(FiniteElement('Discon...us Lagrange', triangle, 0), dim=2), name=None), Mesh(VectorElement(FiniteElement('Lagrange', triangle, 1), dim=2), 83))
rt1 = WithGeometry(FunctionSpace(<firedrake.mesh.MeshTopology object at 0x7f47c876c3e0>, VectorElement(FiniteElement('Raviart-Thomas', triangle, 1), dim=2), name=None), Mesh(VectorElement(FiniteElement('Lagrange', triangle, 1), dim=2), 83))
mesh = Mesh(VectorElement(FiniteElement('Lagrange', triangle, 1), dim=2), 83)
mesh2 = Mesh(VectorElement(FiniteElement('Lagrange', triangle, 1), dim=2), 85)
dual = True

    @pytest.mark.parametrize("space", ["dg0", "rt1"])
    def test_reconstruct_component(space, dg0, rt1, mesh, mesh2, dual):
        Z = {"dg0": dg0, "rt1": rt1}[space]
        if dual:
            Z = Z.dual()
        for component in range(Z.value_size):
>           V1 = Z.sub(component)

tests/regression/test_function_spaces.py:280: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/functionspaceimpl.py:191: in sub
    return self._components[i]
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/functionspaceimpl.py:178: in _components
    return tuple(type(self).create(self.topological.sub(i), self.mesh())
firedrake/functionspaceimpl.py:178: in <genexpr>
    return tuple(type(self).create(self.topological.sub(i), self.mesh())
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

self = FunctionSpace(<firedrake.mesh.MeshTopology object at 0x7f47c876c3e0>, VectorElement(FiniteElement('Raviart-Thomas', triangle, 1), dim=2), name=None)
i = 2

    def sub(self, i):
        r"""Return a view into the ith component."""
        if self.rank == 0:
            assert i == 0
            return self
>       return self._components[i]
E       IndexError: tuple index out of range

firedrake/functionspaceimpl.py:664: IndexError

Check failure on line 297 in tests/regression/test_function_spaces.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_function_spaces.test_reconstruct_sub_component[dual] 

IndexError: tuple index out of range
Raw output 
dg0 = WithGeometry(FunctionSpace(<firedrake.mesh.MeshTopology object at 0x7f47c876c3e0>, VectorElement(FiniteElement('Discon...us Lagrange', triangle, 0), dim=2), name=None), Mesh(VectorElement(FiniteElement('Lagrange', triangle, 1), dim=2), 83))
rt1 = WithGeometry(FunctionSpace(<firedrake.mesh.MeshTopology object at 0x7f47c876c3e0>, VectorElement(FiniteElement('Raviart-Thomas', triangle, 1), dim=2), name=None), Mesh(VectorElement(FiniteElement('Lagrange', triangle, 1), dim=2), 83))
mesh = Mesh(VectorElement(FiniteElement('Lagrange', triangle, 1), dim=2), 83)
mesh2 = Mesh(VectorElement(FiniteElement('Lagrange', triangle, 1), dim=2), 85)
dual = True

    def test_reconstruct_sub_component(dg0, rt1, mesh, mesh2, dual):
        Z = dg0 * rt1
        if dual:
            Z = Z.dual()
        for index, Vsub in enumerate(Z):
            for component in range(Vsub.value_size):
>               V1 = Z.sub(index).sub(component)

tests/regression/test_function_spaces.py:297: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/functionspaceimpl.py:191: in sub
    return self._components[i]
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/functionspaceimpl.py:178: in _components
    return tuple(type(self).create(self.topological.sub(i), self.mesh())
firedrake/functionspaceimpl.py:178: in <genexpr>
    return tuple(type(self).create(self.topological.sub(i), self.mesh())
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

self = IndexedProxyFunctionSpace(<firedrake.mesh.MeshTopology object at 0x7f47c876c3e0>, VectorElement(FiniteElement('Raviart-Thomas', triangle, 1), dim=2), name=None, index=1, component=None)
i = 2

    def sub(self, i):
        r"""Return a view into the ith component."""
        if self.rank == 0:
            assert i == 0
            return self
>       return self._components[i]
E       IndexError: tuple index out of range

firedrake/functionspaceimpl.py:664: IndexError

Check failure on line 280 in tests/regression/test_function_spaces.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_function_spaces.test_reconstruct_component[primal-rt1] 

IndexError: tuple index out of range
Raw output 
space = 'rt1'
dg0 = WithGeometry(FunctionSpace(<firedrake.mesh.MeshTopology object at 0x7f47c876c3e0>, VectorElement(FiniteElement('Discon...us Lagrange', triangle, 0), dim=2), name=None), Mesh(VectorElement(FiniteElement('Lagrange', triangle, 1), dim=2), 83))
rt1 = WithGeometry(FunctionSpace(<firedrake.mesh.MeshTopology object at 0x7f47c876c3e0>, VectorElement(FiniteElement('Raviart-Thomas', triangle, 1), dim=2), name=None), Mesh(VectorElement(FiniteElement('Lagrange', triangle, 1), dim=2), 83))
mesh = Mesh(VectorElement(FiniteElement('Lagrange', triangle, 1), dim=2), 83)
mesh2 = Mesh(VectorElement(FiniteElement('Lagrange', triangle, 1), dim=2), 85)
dual = False

    @pytest.mark.parametrize("space", ["dg0", "rt1"])
    def test_reconstruct_component(space, dg0, rt1, mesh, mesh2, dual):
        Z = {"dg0": dg0, "rt1": rt1}[space]
        if dual:
            Z = Z.dual()
        for component in range(Z.value_size):
>           V1 = Z.sub(component)

tests/regression/test_function_spaces.py:280: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/functionspaceimpl.py:191: in sub
    return self._components[i]
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/functionspaceimpl.py:178: in _components
    return tuple(type(self).create(self.topological.sub(i), self.mesh())
firedrake/functionspaceimpl.py:178: in <genexpr>
    return tuple(type(self).create(self.topological.sub(i), self.mesh())
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

self = FunctionSpace(<firedrake.mesh.MeshTopology object at 0x7f47c876c3e0>, VectorElement(FiniteElement('Raviart-Thomas', triangle, 1), dim=2), name=None)
i = 2

    def sub(self, i):
        r"""Return a view into the ith component."""
        if self.rank == 0:
            assert i == 0
            return self
>       return self._components[i]
E       IndexError: tuple index out of range

firedrake/functionspaceimpl.py:664: IndexError

Check failure on line 218 in tests/vertexonly/test_interpolation_from_parent.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_interpolation_from_parent.test_vector_function_interpolation[extruded-mesh-0-coords-VectorFunctionSpace(CG2)] 

AttributeError: 'VectorElement' object has no attribute 'value_size'
Raw output 
self = Mesh(VectorElement(TensorProductElement(FiniteElement('Lagrange', triangle, 1), FiniteElement('Lagrange', interval, 1), cell=TensorProductCell(triangle, interval)), dim=3), 44)
tolerance = 0.5

    def _c_locator(self, tolerance=None):
        from pyop2 import compilation
        from pyop2.utils import get_petsc_dir
        import firedrake.function as function
        import firedrake.pointquery_utils as pq_utils
    
        cache = self.__dict__.setdefault("_c_locator_cache", {})
        try:
>           return cache[tolerance]
E           KeyError: 0.5

firedrake/mesh.py:2651: KeyError

During handling of the above exception, another exception occurred:

parentmesh = Mesh(VectorElement(TensorProductElement(FiniteElement('Lagrange', triangle, 1), FiniteElement('Lagrange', interval, 1), cell=TensorProductCell(triangle, interval)), dim=3), 44)
vertexcoords = array([], shape=(0, 3), dtype=float64)
vfs = ('CG', 2, <cyfunction VectorFunctionSpace at 0x7fa067fe0860>)

    def test_vector_function_interpolation(parentmesh, vertexcoords, vfs):
        if parentmesh.name == "immersedsphere":
            vertexcoords = immersed_sphere_vertexcoords(parentmesh, vertexcoords)
        vfs_fam, vfs_deg, vfs_typ = vfs
>       vm = VertexOnlyMesh(parentmesh, vertexcoords, missing_points_behaviour=None)

tests/vertexonly/test_interpolation_from_parent.py:218: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/mesh.py:3364: in VertexOnlyMesh
    swarm, input_ordering_swarm, n_missing_points = _pic_swarm_in_mesh(
firedrake/mesh.py:3585: in _pic_swarm_in_mesh
    ) = _parent_mesh_embedding(
firedrake/mesh.py:4151: in _parent_mesh_embedding
    ) = parent_mesh.locate_cells_ref_coords_and_dists(coords_global, tolerance)
firedrake/mesh.py:2633: in locate_cells_ref_coords_and_dists
    self._c_locator(tolerance=tolerance)(self.coordinates._ctypes,
firedrake/mesh.py:2654: in _c_locator
    src = pq_utils.src_locate_cell(self, tolerance=tolerance)
firedrake/pointquery_utils.py:37: in src_locate_cell
    src.append(compile_coordinate_element(mesh.ufl_coordinate_element(), tolerance))
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:217: in compile_coordinate_element
    "to_reference_coords_newton_step": to_reference_coords_newton_step(ufl_coordinate_element, parameters),
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:147: in to_reference_coords_newton_step
    x0_expr = builder._coefficient(x0, "x0")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(TensorProductElement(FiniteElement('Lagrange', triangle, 1), FiniteElemen...e, interval)), dim=3), 45), VectorElement(FiniteElement('Real', TensorProductCell(triangle, interval), 0), dim=3)), 84)
name = 'x0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'VectorElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError

Check failure on line 297 in tests/regression/test_function_spaces.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_function_spaces.test_reconstruct_sub_component[primal] 

IndexError: tuple index out of range
Raw output 
dg0 = WithGeometry(FunctionSpace(<firedrake.mesh.MeshTopology object at 0x7f47c876c3e0>, VectorElement(FiniteElement('Discon...us Lagrange', triangle, 0), dim=2), name=None), Mesh(VectorElement(FiniteElement('Lagrange', triangle, 1), dim=2), 83))
rt1 = WithGeometry(FunctionSpace(<firedrake.mesh.MeshTopology object at 0x7f47c876c3e0>, VectorElement(FiniteElement('Raviart-Thomas', triangle, 1), dim=2), name=None), Mesh(VectorElement(FiniteElement('Lagrange', triangle, 1), dim=2), 83))
mesh = Mesh(VectorElement(FiniteElement('Lagrange', triangle, 1), dim=2), 83)
mesh2 = Mesh(VectorElement(FiniteElement('Lagrange', triangle, 1), dim=2), 85)
dual = False

    def test_reconstruct_sub_component(dg0, rt1, mesh, mesh2, dual):
        Z = dg0 * rt1
        if dual:
            Z = Z.dual()
        for index, Vsub in enumerate(Z):
            for component in range(Vsub.value_size):
>               V1 = Z.sub(index).sub(component)

tests/regression/test_function_spaces.py:297: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/functionspaceimpl.py:191: in sub
    return self._components[i]
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/functionspaceimpl.py:178: in _components
    return tuple(type(self).create(self.topological.sub(i), self.mesh())
firedrake/functionspaceimpl.py:178: in <genexpr>
    return tuple(type(self).create(self.topological.sub(i), self.mesh())
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

self = IndexedProxyFunctionSpace(<firedrake.mesh.MeshTopology object at 0x7f47c876c3e0>, VectorElement(FiniteElement('Raviart-Thomas', triangle, 1), dim=2), name=None, index=1, component=None)
i = 2

    def sub(self, i):
        r"""Return a view into the ith component."""
        if self.rank == 0:
            assert i == 0
            return self
>       return self._components[i]
E       IndexError: tuple index out of range

firedrake/functionspaceimpl.py:664: IndexError

Check failure on line 82 in tests/regression/test_zero_forms.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_zero_forms.test_math_functions[True-tanh(f) + cos(f) + sin(f)-20-constant-vector] 

AttributeError: 'VectorElement' object has no attribute 'value_size'
Raw output 
mesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38)
expr = 'tanh(f) + cos(f) + sin(f)', value = 20, typ = 'constant'
fs_type = 'vector'

    @pytest.mark.parametrize(['expr', 'value', 'typ', 'fs_type'],
                             itertools.product(['f',
                                                '2*f',
                                                'tanh(f)',
                                                '2 * tanh(f)',
                                                'f + tanh(f)',
                                                'cos(f) + sin(f)',
                                                'cos(f)*cos(f) + sin(f)*sin(f)',
                                                'tanh(f) + cos(f) + sin(f)',
                                                '1.0/tanh(f) + 1.0/f',
                                                'sqrt(f*f)',
                                                '1.0/tanh(sqrt(f*f)) + 1.0/f + sqrt(f*f)'],
                                               [1, 10, 20, -1, -10, -20],
                                               ['function', 'constant'],
                                               ['scalar', 'vector', 'tensor']))
    def test_math_functions(mesh, expr, value, typ, fs_type):
        if typ == 'function':
            family, degree = 'CG', 1
        elif typ == 'constant':
            family, degree = 'Real', 0
    
        if fs_type == "vector":
            V = VectorFunctionSpace(mesh, family, degree)
        elif fs_type == "tensor":
            V = TensorFunctionSpace(mesh, family, degree)
        else:
            V = FunctionSpace(mesh, family, degree)
        f = Function(V)
        f.assign(value)
        if fs_type == "vector":
            f = dot(f, f)
        elif fs_type == "tensor":
            f = inner(f, f)
    
>       actual = assemble(eval(expr)*dx)

tests/regression/test_zero_forms.py:82: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/adjoint_utils/assembly.py:30: in wrapper
    output = assemble(form, *args, **kwargs)
firedrake/assemble.py:133: in assemble
    return get_assembler(expr, *args, **kwargs).assemble(tensor=tensor)
firedrake/assemble.py:981: in assemble
    self.execute_parloops(tensor)
firedrake/assemble.py:1000: in execute_parloops
    for parloop in self.parloops(tensor):
firedrake/assemble.py:1011: in parloops
    self._parloops = tuple(parloop_builder.build(tensor) for parloop_builder in self.parloop_builders)
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1017: in parloop_builders
    for local_kernel, subdomain_id in self.local_kernels:
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1052: in local_kernels
    kernels = tsfc_interface.compile_form(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/tsfc_interface.py:220: in compile_form
    tsfc_kernel = TSFCKernel(
firedrake/tsfc_interface.py:95: in __init__
    tree = tsfc_compile_form(form, prefix=name, parameters=parameters,
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
../firedrake_venv/src/tsfc/tsfc/driver.py:74: in compile_form
    kernel = compile_integral(integral_data, fd, prefix, parameters, interface=interface, diagonal=diagonal, log=log)
../firedrake_venv/src/tsfc/tsfc/driver.py:128: in compile_integral
    builder.set_coefficients(integral_data, form_data)
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:345: in set_coefficients
    self._coefficient(coefficient, f"w_{k}")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38), VectorElement(FiniteElement('Real', quadrilateral, 0), dim=2)), 0)
name = 'w_0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'VectorElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError

Check failure on line 82 in tests/regression/test_zero_forms.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_zero_forms.test_math_functions[True-tanh(f) + cos(f) + sin(f)-20-constant-tensor] 

AttributeError: 'TensorElement' object has no attribute 'value_size'
Raw output 
mesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38)
expr = 'tanh(f) + cos(f) + sin(f)', value = 20, typ = 'constant'
fs_type = 'tensor'

    @pytest.mark.parametrize(['expr', 'value', 'typ', 'fs_type'],
                             itertools.product(['f',
                                                '2*f',
                                                'tanh(f)',
                                                '2 * tanh(f)',
                                                'f + tanh(f)',
                                                'cos(f) + sin(f)',
                                                'cos(f)*cos(f) + sin(f)*sin(f)',
                                                'tanh(f) + cos(f) + sin(f)',
                                                '1.0/tanh(f) + 1.0/f',
                                                'sqrt(f*f)',
                                                '1.0/tanh(sqrt(f*f)) + 1.0/f + sqrt(f*f)'],
                                               [1, 10, 20, -1, -10, -20],
                                               ['function', 'constant'],
                                               ['scalar', 'vector', 'tensor']))
    def test_math_functions(mesh, expr, value, typ, fs_type):
        if typ == 'function':
            family, degree = 'CG', 1
        elif typ == 'constant':
            family, degree = 'Real', 0
    
        if fs_type == "vector":
            V = VectorFunctionSpace(mesh, family, degree)
        elif fs_type == "tensor":
            V = TensorFunctionSpace(mesh, family, degree)
        else:
            V = FunctionSpace(mesh, family, degree)
        f = Function(V)
        f.assign(value)
        if fs_type == "vector":
            f = dot(f, f)
        elif fs_type == "tensor":
            f = inner(f, f)
    
>       actual = assemble(eval(expr)*dx)

tests/regression/test_zero_forms.py:82: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/adjoint_utils/assembly.py:30: in wrapper
    output = assemble(form, *args, **kwargs)
firedrake/assemble.py:133: in assemble
    return get_assembler(expr, *args, **kwargs).assemble(tensor=tensor)
firedrake/assemble.py:981: in assemble
    self.execute_parloops(tensor)
firedrake/assemble.py:1000: in execute_parloops
    for parloop in self.parloops(tensor):
firedrake/assemble.py:1011: in parloops
    self._parloops = tuple(parloop_builder.build(tensor) for parloop_builder in self.parloop_builders)
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1017: in parloop_builders
    for local_kernel, subdomain_id in self.local_kernels:
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1052: in local_kernels
    kernels = tsfc_interface.compile_form(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/tsfc_interface.py:220: in compile_form
    tsfc_kernel = TSFCKernel(
firedrake/tsfc_interface.py:95: in __init__
    tree = tsfc_compile_form(form, prefix=name, parameters=parameters,
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
../firedrake_venv/src/tsfc/tsfc/driver.py:74: in compile_form
    kernel = compile_integral(integral_data, fd, prefix, parameters, interface=interface, diagonal=diagonal, log=log)
../firedrake_venv/src/tsfc/tsfc/driver.py:128: in compile_integral
    builder.set_coefficients(integral_data, form_data)
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:345: in set_coefficients
    self._coefficient(coefficient, f"w_{k}")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38), TensorElement(FiniteElement('Real', quadrilateral, 0), shape=(2, 2), symmetry={})), 0)
name = 'w_0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'TensorElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError

Check failure on line 218 in tests/vertexonly/test_interpolation_from_parent.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_interpolation_from_parent.test_vector_function_interpolation[extruded-mesh-1-coords-VectorFunctionSpace(CG2)] 

AttributeError: 'VectorElement' object has no attribute 'value_size'
Raw output 
self = Mesh(VectorElement(TensorProductElement(FiniteElement('Lagrange', triangle, 1), FiniteElement('Lagrange', interval, 1), cell=TensorProductCell(triangle, interval)), dim=3), 73)
tolerance = 0.5

    def _c_locator(self, tolerance=None):
        from pyop2 import compilation
        from pyop2.utils import get_petsc_dir
        import firedrake.function as function
        import firedrake.pointquery_utils as pq_utils
    
        cache = self.__dict__.setdefault("_c_locator_cache", {})
        try:
>           return cache[tolerance]
E           KeyError: 0.5

firedrake/mesh.py:2651: KeyError

During handling of the above exception, another exception occurred:

parentmesh = Mesh(VectorElement(TensorProductElement(FiniteElement('Lagrange', triangle, 1), FiniteElement('Lagrange', interval, 1), cell=TensorProductCell(triangle, interval)), dim=3), 73)
vertexcoords = array([[0.59762701, 0.93037873, 0.70552675]])
vfs = ('CG', 2, <cyfunction VectorFunctionSpace at 0x7fa067fe0860>)

    def test_vector_function_interpolation(parentmesh, vertexcoords, vfs):
        if parentmesh.name == "immersedsphere":
            vertexcoords = immersed_sphere_vertexcoords(parentmesh, vertexcoords)
        vfs_fam, vfs_deg, vfs_typ = vfs
>       vm = VertexOnlyMesh(parentmesh, vertexcoords, missing_points_behaviour=None)

tests/vertexonly/test_interpolation_from_parent.py:218: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/mesh.py:3364: in VertexOnlyMesh
    swarm, input_ordering_swarm, n_missing_points = _pic_swarm_in_mesh(
firedrake/mesh.py:3585: in _pic_swarm_in_mesh
    ) = _parent_mesh_embedding(
firedrake/mesh.py:4151: in _parent_mesh_embedding
    ) = parent_mesh.locate_cells_ref_coords_and_dists(coords_global, tolerance)
firedrake/mesh.py:2633: in locate_cells_ref_coords_and_dists
    self._c_locator(tolerance=tolerance)(self.coordinates._ctypes,
firedrake/mesh.py:2654: in _c_locator
    src = pq_utils.src_locate_cell(self, tolerance=tolerance)
firedrake/pointquery_utils.py:37: in src_locate_cell
    src.append(compile_coordinate_element(mesh.ufl_coordinate_element(), tolerance))
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:217: in compile_coordinate_element
    "to_reference_coords_newton_step": to_reference_coords_newton_step(ufl_coordinate_element, parameters),
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:147: in to_reference_coords_newton_step
    x0_expr = builder._coefficient(x0, "x0")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(TensorProductElement(FiniteElement('Lagrange', triangle, 1), FiniteElemen..., interval)), dim=3), 74), VectorElement(FiniteElement('Real', TensorProductCell(triangle, interval), 0), dim=3)), 103)
name = 'x0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'VectorElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError

Check failure on line 218 in tests/vertexonly/test_interpolation_from_parent.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_interpolation_from_parent.test_vector_function_interpolation[extruded-mesh-100-coords-VectorFunctionSpace(CG2)] 

AttributeError: 'VectorElement' object has no attribute 'value_size'
Raw output 
self = Mesh(VectorElement(TensorProductElement(FiniteElement('Lagrange', triangle, 1), FiniteElement('Lagrange', interval, 1), cell=TensorProductCell(triangle, interval)), dim=3), 102)
tolerance = 0.5

    def _c_locator(self, tolerance=None):
        from pyop2 import compilation
        from pyop2.utils import get_petsc_dir
        import firedrake.function as function
        import firedrake.pointquery_utils as pq_utils
    
        cache = self.__dict__.setdefault("_c_locator_cache", {})
        try:
>           return cache[tolerance]
E           KeyError: 0.5

firedrake/mesh.py:2651: KeyError

During handling of the above exception, another exception occurred:

parentmesh = Mesh(VectorElement(TensorProductElement(FiniteElement('Lagrange', triangle, 1), FiniteElement('Lagrange', interval, 1), cell=TensorProductCell(triangle, interval)), dim=3), 102)
vertexcoords = array([[ 0.59762701,  0.93037873,  0.70552675],
       [ 0.58976637,  0.3473096 ,  0.79178823],
       [ 0.37517442,  ...4423547, -0.12030418],
       [ 0.52263797, -0.05136594, -0.30431103],
       [ 1.22438303,  1.44583898,  1.42166932]])
vfs = ('CG', 2, <cyfunction VectorFunctionSpace at 0x7fa067fe0860>)

    def test_vector_function_interpolation(parentmesh, vertexcoords, vfs):
        if parentmesh.name == "immersedsphere":
            vertexcoords = immersed_sphere_vertexcoords(parentmesh, vertexcoords)
        vfs_fam, vfs_deg, vfs_typ = vfs
>       vm = VertexOnlyMesh(parentmesh, vertexcoords, missing_points_behaviour=None)

tests/vertexonly/test_interpolation_from_parent.py:218: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/mesh.py:3364: in VertexOnlyMesh
    swarm, input_ordering_swarm, n_missing_points = _pic_swarm_in_mesh(
firedrake/mesh.py:3585: in _pic_swarm_in_mesh
    ) = _parent_mesh_embedding(
firedrake/mesh.py:4151: in _parent_mesh_embedding
    ) = parent_mesh.locate_cells_ref_coords_and_dists(coords_global, tolerance)
firedrake/mesh.py:2633: in locate_cells_ref_coords_and_dists
    self._c_locator(tolerance=tolerance)(self.coordinates._ctypes,
firedrake/mesh.py:2654: in _c_locator
    src = pq_utils.src_locate_cell(self, tolerance=tolerance)
firedrake/pointquery_utils.py:37: in src_locate_cell
    src.append(compile_coordinate_element(mesh.ufl_coordinate_element(), tolerance))
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:217: in compile_coordinate_element
    "to_reference_coords_newton_step": to_reference_coords_newton_step(ufl_coordinate_element, parameters),
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:147: in to_reference_coords_newton_step
    x0_expr = builder._coefficient(x0, "x0")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(TensorProductElement(FiniteElement('Lagrange', triangle, 1), FiniteElemen... interval)), dim=3), 103), VectorElement(FiniteElement('Real', TensorProductCell(triangle, interval), 0), dim=3)), 122)
name = 'x0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'VectorElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError

Check failure on line 9 in tests/extrusion/test_zero_forms_extrusion.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_zero_forms_extrusion.test_constant_dx 

AttributeError: 'FiniteElement' object has no attribute 'value_size'
Raw output 
def test_constant_dx():
        mesh = ExtrudedMesh(UnitIntervalMesh(10), 10)
        one = Constant(1, domain=mesh)
>       assert np.allclose(assemble(one * dx), 1.0)

tests/extrusion/test_zero_forms_extrusion.py:9: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/adjoint_utils/assembly.py:30: in wrapper
    output = assemble(form, *args, **kwargs)
firedrake/assemble.py:133: in assemble
    return get_assembler(expr, *args, **kwargs).assemble(tensor=tensor)
firedrake/assemble.py:981: in assemble
    self.execute_parloops(tensor)
firedrake/assemble.py:1000: in execute_parloops
    for parloop in self.parloops(tensor):
firedrake/assemble.py:1011: in parloops
    self._parloops = tuple(parloop_builder.build(tensor) for parloop_builder in self.parloop_builders)
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1017: in parloop_builders
    for local_kernel, subdomain_id in self.local_kernels:
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1052: in local_kernels
    kernels = tsfc_interface.compile_form(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/tsfc_interface.py:220: in compile_form
    tsfc_kernel = TSFCKernel(
firedrake/tsfc_interface.py:95: in __init__
    tree = tsfc_compile_form(form, prefix=name, parameters=parameters,
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
../firedrake_venv/src/tsfc/tsfc/driver.py:74: in compile_form
    kernel = compile_integral(integral_data, fd, prefix, parameters, interface=interface, diagonal=diagonal, log=log)
../firedrake_venv/src/tsfc/tsfc/driver.py:128: in compile_integral
    builder.set_coefficients(integral_data, form_data)
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:345: in set_coefficients
    self._coefficient(coefficient, f"w_{k}")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(TensorProductElement(FiniteElement('Lagrange', interval, 1), FiniteElemen...nsorProductCell(interval, interval)), dim=2), 45), FiniteElement('Real', TensorProductCell(interval, interval), 0)), 0)
name = 'w_0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'FiniteElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError

Check failure on line 218 in tests/vertexonly/test_interpolation_from_parent.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_interpolation_from_parent.test_vector_function_interpolation[cube-mesh-0-coords-VectorFunctionSpace(CG2)] 

AttributeError: 'VectorElement' object has no attribute 'value_size'
Raw output 
self = Mesh(VectorElement(FiniteElement('Lagrange', tetrahedron, 1), dim=3), 128)
tolerance = 0.5

    def _c_locator(self, tolerance=None):
        from pyop2 import compilation
        from pyop2.utils import get_petsc_dir
        import firedrake.function as function
        import firedrake.pointquery_utils as pq_utils
    
        cache = self.__dict__.setdefault("_c_locator_cache", {})
        try:
>           return cache[tolerance]
E           KeyError: 0.5

firedrake/mesh.py:2651: KeyError

During handling of the above exception, another exception occurred:

parentmesh = Mesh(VectorElement(FiniteElement('Lagrange', tetrahedron, 1), dim=3), 128)
vertexcoords = array([], shape=(0, 3), dtype=float64)
vfs = ('CG', 2, <cyfunction VectorFunctionSpace at 0x7fa067fe0860>)

    def test_vector_function_interpolation(parentmesh, vertexcoords, vfs):
        if parentmesh.name == "immersedsphere":
            vertexcoords = immersed_sphere_vertexcoords(parentmesh, vertexcoords)
        vfs_fam, vfs_deg, vfs_typ = vfs
>       vm = VertexOnlyMesh(parentmesh, vertexcoords, missing_points_behaviour=None)

tests/vertexonly/test_interpolation_from_parent.py:218: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/mesh.py:3364: in VertexOnlyMesh
    swarm, input_ordering_swarm, n_missing_points = _pic_swarm_in_mesh(
firedrake/mesh.py:3585: in _pic_swarm_in_mesh
    ) = _parent_mesh_embedding(
firedrake/mesh.py:4151: in _parent_mesh_embedding
    ) = parent_mesh.locate_cells_ref_coords_and_dists(coords_global, tolerance)
firedrake/mesh.py:2633: in locate_cells_ref_coords_and_dists
    self._c_locator(tolerance=tolerance)(self.coordinates._ctypes,
firedrake/mesh.py:2654: in _c_locator
    src = pq_utils.src_locate_cell(self, tolerance=tolerance)
firedrake/pointquery_utils.py:37: in src_locate_cell
    src.append(compile_coordinate_element(mesh.ufl_coordinate_element(), tolerance))
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:217: in compile_coordinate_element
    "to_reference_coords_newton_step": to_reference_coords_newton_step(ufl_coordinate_element, parameters),
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:147: in to_reference_coords_newton_step
    x0_expr = builder._coefficient(x0, "x0")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(FiniteElement('Lagrange', tetrahedron, 1), dim=3), 130), VectorElement(FiniteElement('Real', tetrahedron, 0), dim=3)), 140)
name = 'x0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'VectorElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError

Check failure on line 136 in tests/demos/test_demos_run.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_demos_run.test_demo_runs[ma-demo.py.rst] 

subprocess.CalledProcessError: Command '['/__w/firedrake/firedrake_venv/bin/python', '/tmp/pytest-of-firedrake/pytest-0/popen-gw0/test_demo_runs_ma_demo_py_rst_0/ma-demo.py']' returned non-zero exit status 1.
Raw output 
py_file = '/tmp/pytest-of-firedrake/pytest-0/popen-gw0/test_demo_runs_ma_demo_py_rst_0/ma-demo.py'
env = {'CI': 'true', 'COMPLEX': '', 'FIREDRAKE_CI_TESTS': '1', 'FIREDRAKE_TSFC_KERNEL_CACHE_DIR': '/__w/firedrake/firedrake_venv/.cache/tsfc', ...}

    @pytest.mark.skipcomplex  # Will need to add a seperate case for a complex demo.
    def test_demo_runs(py_file, env):
        # Add pytest skips for missing imports or packages
        if basename(py_file) in ("stokes.py", "rayleigh-benard.py", "saddle_point_systems.py", "navier_stokes.py", "netgen_mesh.py"):
            if "mumps" not in get_external_packages():
                pytest.skip("MUMPS not installed with PETSc")
    
        if basename(py_file) in ("stokes.py", "rayleigh-benard.py", "saddle_point_systems.py", "qg_1layer_wave.py"):
            if "hypre" not in get_external_packages():
                pytest.skip("hypre not installed with PETSc")
    
        if basename(py_file) == "qgbasinmodes.py":
            try:
                # Do not use `pytest.importorskip` to check for slepc4py:
                # It isn't sufficient to actually detect whether slepc4py
                # is installed. Both petsc4py and slepc4py require
                # `from xy4py import Xy`
                # to actually load the library.
                from slepc4py import SLEPc  # noqa: F401
            except ImportError:
                pytest.skip(reason="SLEPc unavailable, skipping qgbasinmodes.py")
    
        if basename(py_file) in ("DG_advection.py", "qgbasinmodes.py"):
            pytest.importorskip(
                "matplotlib",
                reason=f"Matplotlib unavailable, skipping {basename(py_file)}"
            )
    
        if basename(py_file) == "netgen_mesh.py":
            pytest.importorskip(
                "netgen",
                reason="Netgen unavailable, skipping Netgen test."
            )
            pytest.importorskip(
                "ngsPETSc",
                reason="ngsPETSc unavailable, skipping Netgen test."
            )
            try:
                from slepc4py import SLEPc  # noqa: F401, F811
            except ImportError:
                pytest.skip(reason="SLEPc unavailable, skipping netgen_mesh.py")
    
        if basename(py_file) in VTK_DEMOS:
            try:
                import vtkmodules.vtkCommonDataModel  # noqa: F401
            except ImportError:
                pytest.skip(reason=f"VTK unavailable, skipping {basename(py_file)}")
        if basename(py_file) in parallel_demos:
            if basename(py_file) == "full_waveform_inversion.py":
                processes = 2
            else:
                raise NotImplementedError("You need to specify the number of processes for this test")
    
            executable = ["mpiexec", "-n", str(processes), sys.executable, py_file]
        else:
            executable = [sys.executable, py_file]
    
>       subprocess.check_call(executable, env=env)

/__w/firedrake/firedrake/tests/demos/test_demos_run.py:136: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

popenargs = (['/__w/firedrake/firedrake_venv/bin/python', '/tmp/pytest-of-firedrake/pytest-0/popen-gw0/test_demo_runs_ma_demo_py_rst_0/ma-demo.py'],)
kwargs = {'env': {'CI': 'true', 'COMPLEX': '', 'FIREDRAKE_CI_TESTS': '1', 'FIREDRAKE_TSFC_KERNEL_CACHE_DIR': '/__w/firedrake/firedrake_venv/.cache/tsfc', ...}}
retcode = 1
cmd = ['/__w/firedrake/firedrake_venv/bin/python', '/tmp/pytest-of-firedrake/pytest-0/popen-gw0/test_demo_runs_ma_demo_py_rst_0/ma-demo.py']

    def check_call(*popenargs, **kwargs):
        """Run command with arguments.  Wait for command to complete.  If
        the exit code was zero then return, otherwise raise
        CalledProcessError.  The CalledProcessError object will have the
        return code in the returncode attribute.
    
        The arguments are the same as for the call function.  Example:
    
        check_call(["ls", "-l"])
        """
        retcode = call(*popenargs, **kwargs)
        if retcode:
            cmd = kwargs.get("args")
            if cmd is None:
                cmd = popenargs[0]
>           raise CalledProcessError(retcode, cmd)
E           subprocess.CalledProcessError: Command '['/__w/firedrake/firedrake_venv/bin/python', '/tmp/pytest-of-firedrake/pytest-0/popen-gw0/test_demo_runs_ma_demo_py_rst_0/ma-demo.py']' returned non-zero exit status 1.

/usr/lib/python3.12/subprocess.py:413: CalledProcessError

Check failure on line 218 in tests/vertexonly/test_interpolation_from_parent.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_interpolation_from_parent.test_vector_function_interpolation[cube-mesh-0-coords-FunctionSpace(N1curl2)] 

AttributeError: 'VectorElement' object has no attribute 'value_size'
Raw output 
self = Mesh(VectorElement(FiniteElement('Lagrange', tetrahedron, 1), dim=3), 131)
tolerance = 0.5

    def _c_locator(self, tolerance=None):
        from pyop2 import compilation
        from pyop2.utils import get_petsc_dir
        import firedrake.function as function
        import firedrake.pointquery_utils as pq_utils
    
        cache = self.__dict__.setdefault("_c_locator_cache", {})
        try:
>           return cache[tolerance]
E           KeyError: 0.5

firedrake/mesh.py:2651: KeyError

During handling of the above exception, another exception occurred:

parentmesh = Mesh(VectorElement(FiniteElement('Lagrange', tetrahedron, 1), dim=3), 131)
vertexcoords = array([], shape=(0, 3), dtype=float64)
vfs = ('N1curl', 2, <cyfunction FunctionSpace at 0x7fa067fe06c0>)

    def test_vector_function_interpolation(parentmesh, vertexcoords, vfs):
        if parentmesh.name == "immersedsphere":
            vertexcoords = immersed_sphere_vertexcoords(parentmesh, vertexcoords)
        vfs_fam, vfs_deg, vfs_typ = vfs
>       vm = VertexOnlyMesh(parentmesh, vertexcoords, missing_points_behaviour=None)

tests/vertexonly/test_interpolation_from_parent.py:218: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/mesh.py:3364: in VertexOnlyMesh
    swarm, input_ordering_swarm, n_missing_points = _pic_swarm_in_mesh(
firedrake/mesh.py:3585: in _pic_swarm_in_mesh
    ) = _parent_mesh_embedding(
firedrake/mesh.py:4151: in _parent_mesh_embedding
    ) = parent_mesh.locate_cells_ref_coords_and_dists(coords_global, tolerance)
firedrake/mesh.py:2633: in locate_cells_ref_coords_and_dists
    self._c_locator(tolerance=tolerance)(self.coordinates._ctypes,
firedrake/mesh.py:2654: in _c_locator
    src = pq_utils.src_locate_cell(self, tolerance=tolerance)
firedrake/pointquery_utils.py:37: in src_locate_cell
    src.append(compile_coordinate_element(mesh.ufl_coordinate_element(), tolerance))
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:217: in compile_coordinate_element
    "to_reference_coords_newton_step": to_reference_coords_newton_step(ufl_coordinate_element, parameters),
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:147: in to_reference_coords_newton_step
    x0_expr = builder._coefficient(x0, "x0")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(FiniteElement('Lagrange', tetrahedron, 1), dim=3), 133), VectorElement(FiniteElement('Real', tetrahedron, 0), dim=3)), 146)
name = 'x0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'VectorElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError

Check failure on line 82 in tests/regression/test_zero_forms.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_zero_forms.test_math_functions[True-tanh(f) + cos(f) + sin(f)--1-constant-scalar] 

AttributeError: 'FiniteElement' object has no attribute 'value_size'
Raw output 
mesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38)
expr = 'tanh(f) + cos(f) + sin(f)', value = -1, typ = 'constant'
fs_type = 'scalar'

    @pytest.mark.parametrize(['expr', 'value', 'typ', 'fs_type'],
                             itertools.product(['f',
                                                '2*f',
                                                'tanh(f)',
                                                '2 * tanh(f)',
                                                'f + tanh(f)',
                                                'cos(f) + sin(f)',
                                                'cos(f)*cos(f) + sin(f)*sin(f)',
                                                'tanh(f) + cos(f) + sin(f)',
                                                '1.0/tanh(f) + 1.0/f',
                                                'sqrt(f*f)',
                                                '1.0/tanh(sqrt(f*f)) + 1.0/f + sqrt(f*f)'],
                                               [1, 10, 20, -1, -10, -20],
                                               ['function', 'constant'],
                                               ['scalar', 'vector', 'tensor']))
    def test_math_functions(mesh, expr, value, typ, fs_type):
        if typ == 'function':
            family, degree = 'CG', 1
        elif typ == 'constant':
            family, degree = 'Real', 0
    
        if fs_type == "vector":
            V = VectorFunctionSpace(mesh, family, degree)
        elif fs_type == "tensor":
            V = TensorFunctionSpace(mesh, family, degree)
        else:
            V = FunctionSpace(mesh, family, degree)
        f = Function(V)
        f.assign(value)
        if fs_type == "vector":
            f = dot(f, f)
        elif fs_type == "tensor":
            f = inner(f, f)
    
>       actual = assemble(eval(expr)*dx)

tests/regression/test_zero_forms.py:82: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/adjoint_utils/assembly.py:30: in wrapper
    output = assemble(form, *args, **kwargs)
firedrake/assemble.py:133: in assemble
    return get_assembler(expr, *args, **kwargs).assemble(tensor=tensor)
firedrake/assemble.py:981: in assemble
    self.execute_parloops(tensor)
firedrake/assemble.py:1000: in execute_parloops
    for parloop in self.parloops(tensor):
firedrake/assemble.py:1011: in parloops
    self._parloops = tuple(parloop_builder.build(tensor) for parloop_builder in self.parloop_builders)
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1017: in parloop_builders
    for local_kernel, subdomain_id in self.local_kernels:
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1052: in local_kernels
    kernels = tsfc_interface.compile_form(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/tsfc_interface.py:220: in compile_form
    tsfc_kernel = TSFCKernel(
firedrake/tsfc_interface.py:95: in __init__
    tree = tsfc_compile_form(form, prefix=name, parameters=parameters,
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
../firedrake_venv/src/tsfc/tsfc/driver.py:74: in compile_form
    kernel = compile_integral(integral_data, fd, prefix, parameters, interface=interface, diagonal=diagonal, log=log)
../firedrake_venv/src/tsfc/tsfc/driver.py:128: in compile_integral
    builder.set_coefficients(integral_data, form_data)
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:345: in set_coefficients
    self._coefficient(coefficient, f"w_{k}")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38), FiniteElement('Real', quadrilateral, 0)), 0)
name = 'w_0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'FiniteElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError

Check failure on line 218 in tests/vertexonly/test_interpolation_from_parent.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_interpolation_from_parent.test_vector_function_interpolation[cube-mesh-0-coords-FunctionSpace(N2curl2)] 

AttributeError: 'VectorElement' object has no attribute 'value_size'
Raw output 
self = Mesh(VectorElement(FiniteElement('Lagrange', tetrahedron, 1), dim=3), 134)
tolerance = 0.5

    def _c_locator(self, tolerance=None):
        from pyop2 import compilation
        from pyop2.utils import get_petsc_dir
        import firedrake.function as function
        import firedrake.pointquery_utils as pq_utils
    
        cache = self.__dict__.setdefault("_c_locator_cache", {})
        try:
>           return cache[tolerance]
E           KeyError: 0.5

firedrake/mesh.py:2651: KeyError

During handling of the above exception, another exception occurred:

parentmesh = Mesh(VectorElement(FiniteElement('Lagrange', tetrahedron, 1), dim=3), 134)
vertexcoords = array([], shape=(0, 3), dtype=float64)
vfs = ('N2curl', 2, <cyfunction FunctionSpace at 0x7fa067fe06c0>)

    def test_vector_function_interpolation(parentmesh, vertexcoords, vfs):
        if parentmesh.name == "immersedsphere":
            vertexcoords = immersed_sphere_vertexcoords(parentmesh, vertexcoords)
        vfs_fam, vfs_deg, vfs_typ = vfs
>       vm = VertexOnlyMesh(parentmesh, vertexcoords, missing_points_behaviour=None)

tests/vertexonly/test_interpolation_from_parent.py:218: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/mesh.py:3364: in VertexOnlyMesh
    swarm, input_ordering_swarm, n_missing_points = _pic_swarm_in_mesh(
firedrake/mesh.py:3585: in _pic_swarm_in_mesh
    ) = _parent_mesh_embedding(
firedrake/mesh.py:4151: in _parent_mesh_embedding
    ) = parent_mesh.locate_cells_ref_coords_and_dists(coords_global, tolerance)
firedrake/mesh.py:2633: in locate_cells_ref_coords_and_dists
    self._c_locator(tolerance=tolerance)(self.coordinates._ctypes,
firedrake/mesh.py:2654: in _c_locator
    src = pq_utils.src_locate_cell(self, tolerance=tolerance)
firedrake/pointquery_utils.py:37: in src_locate_cell
    src.append(compile_coordinate_element(mesh.ufl_coordinate_element(), tolerance))
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:217: in compile_coordinate_element
    "to_reference_coords_newton_step": to_reference_coords_newton_step(ufl_coordinate_element, parameters),
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:147: in to_reference_coords_newton_step
    x0_expr = builder._coefficient(x0, "x0")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(FiniteElement('Lagrange', tetrahedron, 1), dim=3), 136), VectorElement(FiniteElement('Real', tetrahedron, 0), dim=3)), 152)
name = 'x0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'VectorElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError

Check failure on line 82 in tests/regression/test_zero_forms.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_zero_forms.test_math_functions[True-tanh(f) + cos(f) + sin(f)--1-constant-vector] 

AttributeError: 'VectorElement' object has no attribute 'value_size'
Raw output 
mesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38)
expr = 'tanh(f) + cos(f) + sin(f)', value = -1, typ = 'constant'
fs_type = 'vector'

    @pytest.mark.parametrize(['expr', 'value', 'typ', 'fs_type'],
                             itertools.product(['f',
                                                '2*f',
                                                'tanh(f)',
                                                '2 * tanh(f)',
                                                'f + tanh(f)',
                                                'cos(f) + sin(f)',
                                                'cos(f)*cos(f) + sin(f)*sin(f)',
                                                'tanh(f) + cos(f) + sin(f)',
                                                '1.0/tanh(f) + 1.0/f',
                                                'sqrt(f*f)',
                                                '1.0/tanh(sqrt(f*f)) + 1.0/f + sqrt(f*f)'],
                                               [1, 10, 20, -1, -10, -20],
                                               ['function', 'constant'],
                                               ['scalar', 'vector', 'tensor']))
    def test_math_functions(mesh, expr, value, typ, fs_type):
        if typ == 'function':
            family, degree = 'CG', 1
        elif typ == 'constant':
            family, degree = 'Real', 0
    
        if fs_type == "vector":
            V = VectorFunctionSpace(mesh, family, degree)
        elif fs_type == "tensor":
            V = TensorFunctionSpace(mesh, family, degree)
        else:
            V = FunctionSpace(mesh, family, degree)
        f = Function(V)
        f.assign(value)
        if fs_type == "vector":
            f = dot(f, f)
        elif fs_type == "tensor":
            f = inner(f, f)
    
>       actual = assemble(eval(expr)*dx)

tests/regression/test_zero_forms.py:82: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/adjoint_utils/assembly.py:30: in wrapper
    output = assemble(form, *args, **kwargs)
firedrake/assemble.py:133: in assemble
    return get_assembler(expr, *args, **kwargs).assemble(tensor=tensor)
firedrake/assemble.py:981: in assemble
    self.execute_parloops(tensor)
firedrake/assemble.py:1000: in execute_parloops
    for parloop in self.parloops(tensor):
firedrake/assemble.py:1011: in parloops
    self._parloops = tuple(parloop_builder.build(tensor) for parloop_builder in self.parloop_builders)
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1017: in parloop_builders
    for local_kernel, subdomain_id in self.local_kernels:
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1052: in local_kernels
    kernels = tsfc_interface.compile_form(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/tsfc_interface.py:220: in compile_form
    tsfc_kernel = TSFCKernel(
firedrake/tsfc_interface.py:95: in __init__
    tree = tsfc_compile_form(form, prefix=name, parameters=parameters,
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
../firedrake_venv/src/tsfc/tsfc/driver.py:74: in compile_form
    kernel = compile_integral(integral_data, fd, prefix, parameters, interface=interface, diagonal=diagonal, log=log)
../firedrake_venv/src/tsfc/tsfc/driver.py:128: in compile_integral
    builder.set_coefficients(integral_data, form_data)
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:345: in set_coefficients
    self._coefficient(coefficient, f"w_{k}")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38), VectorElement(FiniteElement('Real', quadrilateral, 0), dim=2)), 0)
name = 'w_0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'VectorElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError

Check failure on line 218 in tests/vertexonly/test_interpolation_from_parent.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_interpolation_from_parent.test_vector_function_interpolation[cube-mesh-0-coords-FunctionSpace(N1div2)] 

AttributeError: 'VectorElement' object has no attribute 'value_size'
Raw output 
self = Mesh(VectorElement(FiniteElement('Lagrange', tetrahedron, 1), dim=3), 137)
tolerance = 0.5

    def _c_locator(self, tolerance=None):
        from pyop2 import compilation
        from pyop2.utils import get_petsc_dir
        import firedrake.function as function
        import firedrake.pointquery_utils as pq_utils
    
        cache = self.__dict__.setdefault("_c_locator_cache", {})
        try:
>           return cache[tolerance]
E           KeyError: 0.5

firedrake/mesh.py:2651: KeyError

During handling of the above exception, another exception occurred:

parentmesh = Mesh(VectorElement(FiniteElement('Lagrange', tetrahedron, 1), dim=3), 137)
vertexcoords = array([], shape=(0, 3), dtype=float64)
vfs = ('N1div', 2, <cyfunction FunctionSpace at 0x7fa067fe06c0>)

    def test_vector_function_interpolation(parentmesh, vertexcoords, vfs):
        if parentmesh.name == "immersedsphere":
            vertexcoords = immersed_sphere_vertexcoords(parentmesh, vertexcoords)
        vfs_fam, vfs_deg, vfs_typ = vfs
>       vm = VertexOnlyMesh(parentmesh, vertexcoords, missing_points_behaviour=None)

tests/vertexonly/test_interpolation_from_parent.py:218: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/mesh.py:3364: in VertexOnlyMesh
    swarm, input_ordering_swarm, n_missing_points = _pic_swarm_in_mesh(
firedrake/mesh.py:3585: in _pic_swarm_in_mesh
    ) = _parent_mesh_embedding(
firedrake/mesh.py:4151: in _parent_mesh_embedding
    ) = parent_mesh.locate_cells_ref_coords_and_dists(coords_global, tolerance)
firedrake/mesh.py:2633: in locate_cells_ref_coords_and_dists
    self._c_locator(tolerance=tolerance)(self.coordinates._ctypes,
firedrake/mesh.py:2654: in _c_locator
    src = pq_utils.src_locate_cell(self, tolerance=tolerance)
firedrake/pointquery_utils.py:37: in src_locate_cell
    src.append(compile_coordinate_element(mesh.ufl_coordinate_element(), tolerance))
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:217: in compile_coordinate_element
    "to_reference_coords_newton_step": to_reference_coords_newton_step(ufl_coordinate_element, parameters),
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:147: in to_reference_coords_newton_step
    x0_expr = builder._coefficient(x0, "x0")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(FiniteElement('Lagrange', tetrahedron, 1), dim=3), 139), VectorElement(FiniteElement('Real', tetrahedron, 0), dim=3)), 158)
name = 'x0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'VectorElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError

Check failure on line 82 in tests/regression/test_zero_forms.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_zero_forms.test_math_functions[True-tanh(f) + cos(f) + sin(f)--1-constant-tensor] 

AttributeError: 'TensorElement' object has no attribute 'value_size'
Raw output 
mesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38)
expr = 'tanh(f) + cos(f) + sin(f)', value = -1, typ = 'constant'
fs_type = 'tensor'

    @pytest.mark.parametrize(['expr', 'value', 'typ', 'fs_type'],
                             itertools.product(['f',
                                                '2*f',
                                                'tanh(f)',
                                                '2 * tanh(f)',
                                                'f + tanh(f)',
                                                'cos(f) + sin(f)',
                                                'cos(f)*cos(f) + sin(f)*sin(f)',
                                                'tanh(f) + cos(f) + sin(f)',
                                                '1.0/tanh(f) + 1.0/f',
                                                'sqrt(f*f)',
                                                '1.0/tanh(sqrt(f*f)) + 1.0/f + sqrt(f*f)'],
                                               [1, 10, 20, -1, -10, -20],
                                               ['function', 'constant'],
                                               ['scalar', 'vector', 'tensor']))
    def test_math_functions(mesh, expr, value, typ, fs_type):
        if typ == 'function':
            family, degree = 'CG', 1
        elif typ == 'constant':
            family, degree = 'Real', 0
    
        if fs_type == "vector":
            V = VectorFunctionSpace(mesh, family, degree)
        elif fs_type == "tensor":
            V = TensorFunctionSpace(mesh, family, degree)
        else:
            V = FunctionSpace(mesh, family, degree)
        f = Function(V)
        f.assign(value)
        if fs_type == "vector":
            f = dot(f, f)
        elif fs_type == "tensor":
            f = inner(f, f)
    
>       actual = assemble(eval(expr)*dx)

tests/regression/test_zero_forms.py:82: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/adjoint_utils/assembly.py:30: in wrapper
    output = assemble(form, *args, **kwargs)
firedrake/assemble.py:133: in assemble
    return get_assembler(expr, *args, **kwargs).assemble(tensor=tensor)
firedrake/assemble.py:981: in assemble
    self.execute_parloops(tensor)
firedrake/assemble.py:1000: in execute_parloops
    for parloop in self.parloops(tensor):
firedrake/assemble.py:1011: in parloops
    self._parloops = tuple(parloop_builder.build(tensor) for parloop_builder in self.parloop_builders)
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1017: in parloop_builders
    for local_kernel, subdomain_id in self.local_kernels:
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1052: in local_kernels
    kernels = tsfc_interface.compile_form(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/tsfc_interface.py:220: in compile_form
    tsfc_kernel = TSFCKernel(
firedrake/tsfc_interface.py:95: in __init__
    tree = tsfc_compile_form(form, prefix=name, parameters=parameters,
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
../firedrake_venv/src/tsfc/tsfc/driver.py:74: in compile_form
    kernel = compile_integral(integral_data, fd, prefix, parameters, interface=interface, diagonal=diagonal, log=log)
../firedrake_venv/src/tsfc/tsfc/driver.py:128: in compile_integral
    builder.set_coefficients(integral_data, form_data)
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:345: in set_coefficients
    self._coefficient(coefficient, f"w_{k}")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38), TensorElement(FiniteElement('Real', quadrilateral, 0), shape=(2, 2), symmetry={})), 0)
name = 'w_0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'TensorElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError

Check failure on line 218 in tests/vertexonly/test_interpolation_from_parent.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_interpolation_from_parent.test_vector_function_interpolation[cube-mesh-0-coords-FunctionSpace(N2div2)] 

AttributeError: 'VectorElement' object has no attribute 'value_size'
Raw output 
self = Mesh(VectorElement(FiniteElement('Lagrange', tetrahedron, 1), dim=3), 140)
tolerance = 0.5

    def _c_locator(self, tolerance=None):
        from pyop2 import compilation
        from pyop2.utils import get_petsc_dir
        import firedrake.function as function
        import firedrake.pointquery_utils as pq_utils
    
        cache = self.__dict__.setdefault("_c_locator_cache", {})
        try:
>           return cache[tolerance]
E           KeyError: 0.5

firedrake/mesh.py:2651: KeyError

During handling of the above exception, another exception occurred:

parentmesh = Mesh(VectorElement(FiniteElement('Lagrange', tetrahedron, 1), dim=3), 140)
vertexcoords = array([], shape=(0, 3), dtype=float64)
vfs = ('N2div', 2, <cyfunction FunctionSpace at 0x7fa067fe06c0>)

    def test_vector_function_interpolation(parentmesh, vertexcoords, vfs):
        if parentmesh.name == "immersedsphere":
            vertexcoords = immersed_sphere_vertexcoords(parentmesh, vertexcoords)
        vfs_fam, vfs_deg, vfs_typ = vfs
>       vm = VertexOnlyMesh(parentmesh, vertexcoords, missing_points_behaviour=None)

tests/vertexonly/test_interpolation_from_parent.py:218: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/mesh.py:3364: in VertexOnlyMesh
    swarm, input_ordering_swarm, n_missing_points = _pic_swarm_in_mesh(
firedrake/mesh.py:3585: in _pic_swarm_in_mesh
    ) = _parent_mesh_embedding(
firedrake/mesh.py:4151: in _parent_mesh_embedding
    ) = parent_mesh.locate_cells_ref_coords_and_dists(coords_global, tolerance)
firedrake/mesh.py:2633: in locate_cells_ref_coords_and_dists
    self._c_locator(tolerance=tolerance)(self.coordinates._ctypes,
firedrake/mesh.py:2654: in _c_locator
    src = pq_utils.src_locate_cell(self, tolerance=tolerance)
firedrake/pointquery_utils.py:37: in src_locate_cell
    src.append(compile_coordinate_element(mesh.ufl_coordinate_element(), tolerance))
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:217: in compile_coordinate_element
    "to_reference_coords_newton_step": to_reference_coords_newton_step(ufl_coordinate_element, parameters),
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:147: in to_reference_coords_newton_step
    x0_expr = builder._coefficient(x0, "x0")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(FiniteElement('Lagrange', tetrahedron, 1), dim=3), 142), VectorElement(FiniteElement('Real', tetrahedron, 0), dim=3)), 164)
name = 'x0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'VectorElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError

Check failure on line 82 in tests/regression/test_zero_forms.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_zero_forms.test_math_functions[True-tanh(f) + cos(f) + sin(f)--10-constant-scalar] 

AttributeError: 'FiniteElement' object has no attribute 'value_size'
Raw output 
mesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38)
expr = 'tanh(f) + cos(f) + sin(f)', value = -10, typ = 'constant'
fs_type = 'scalar'

    @pytest.mark.parametrize(['expr', 'value', 'typ', 'fs_type'],
                             itertools.product(['f',
                                                '2*f',
                                                'tanh(f)',
                                                '2 * tanh(f)',
                                                'f + tanh(f)',
                                                'cos(f) + sin(f)',
                                                'cos(f)*cos(f) + sin(f)*sin(f)',
                                                'tanh(f) + cos(f) + sin(f)',
                                                '1.0/tanh(f) + 1.0/f',
                                                'sqrt(f*f)',
                                                '1.0/tanh(sqrt(f*f)) + 1.0/f + sqrt(f*f)'],
                                               [1, 10, 20, -1, -10, -20],
                                               ['function', 'constant'],
                                               ['scalar', 'vector', 'tensor']))
    def test_math_functions(mesh, expr, value, typ, fs_type):
        if typ == 'function':
            family, degree = 'CG', 1
        elif typ == 'constant':
            family, degree = 'Real', 0
    
        if fs_type == "vector":
            V = VectorFunctionSpace(mesh, family, degree)
        elif fs_type == "tensor":
            V = TensorFunctionSpace(mesh, family, degree)
        else:
            V = FunctionSpace(mesh, family, degree)
        f = Function(V)
        f.assign(value)
        if fs_type == "vector":
            f = dot(f, f)
        elif fs_type == "tensor":
            f = inner(f, f)
    
>       actual = assemble(eval(expr)*dx)

tests/regression/test_zero_forms.py:82: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/adjoint_utils/assembly.py:30: in wrapper
    output = assemble(form, *args, **kwargs)
firedrake/assemble.py:133: in assemble
    return get_assembler(expr, *args, **kwargs).assemble(tensor=tensor)
firedrake/assemble.py:981: in assemble
    self.execute_parloops(tensor)
firedrake/assemble.py:1000: in execute_parloops
    for parloop in self.parloops(tensor):
firedrake/assemble.py:1011: in parloops
    self._parloops = tuple(parloop_builder.build(tensor) for parloop_builder in self.parloop_builders)
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1017: in parloop_builders
    for local_kernel, subdomain_id in self.local_kernels:
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1052: in local_kernels
    kernels = tsfc_interface.compile_form(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/tsfc_interface.py:220: in compile_form
    tsfc_kernel = TSFCKernel(
firedrake/tsfc_interface.py:95: in __init__
    tree = tsfc_compile_form(form, prefix=name, parameters=parameters,
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
../firedrake_venv/src/tsfc/tsfc/driver.py:74: in compile_form
    kernel = compile_integral(integral_data, fd, prefix, parameters, interface=interface, diagonal=diagonal, log=log)
../firedrake_venv/src/tsfc/tsfc/driver.py:128: in compile_integral
    builder.set_coefficients(integral_data, form_data)
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:345: in set_coefficients
    self._coefficient(coefficient, f"w_{k}")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38), FiniteElement('Real', quadrilateral, 0)), 0)
name = 'w_0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'FiniteElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError

Check failure on line 82 in tests/regression/test_zero_forms.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_zero_forms.test_math_functions[True-tanh(f) + cos(f) + sin(f)--10-constant-vector] 

AttributeError: 'VectorElement' object has no attribute 'value_size'
Raw output 
mesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38)
expr = 'tanh(f) + cos(f) + sin(f)', value = -10, typ = 'constant'
fs_type = 'vector'

    @pytest.mark.parametrize(['expr', 'value', 'typ', 'fs_type'],
                             itertools.product(['f',
                                                '2*f',
                                                'tanh(f)',
                                                '2 * tanh(f)',
                                                'f + tanh(f)',
                                                'cos(f) + sin(f)',
                                                'cos(f)*cos(f) + sin(f)*sin(f)',
                                                'tanh(f) + cos(f) + sin(f)',
                                                '1.0/tanh(f) + 1.0/f',
                                                'sqrt(f*f)',
                                                '1.0/tanh(sqrt(f*f)) + 1.0/f + sqrt(f*f)'],
                                               [1, 10, 20, -1, -10, -20],
                                               ['function', 'constant'],
                                               ['scalar', 'vector', 'tensor']))
    def test_math_functions(mesh, expr, value, typ, fs_type):
        if typ == 'function':
            family, degree = 'CG', 1
        elif typ == 'constant':
            family, degree = 'Real', 0
    
        if fs_type == "vector":
            V = VectorFunctionSpace(mesh, family, degree)
        elif fs_type == "tensor":
            V = TensorFunctionSpace(mesh, family, degree)
        else:
            V = FunctionSpace(mesh, family, degree)
        f = Function(V)
        f.assign(value)
        if fs_type == "vector":
            f = dot(f, f)
        elif fs_type == "tensor":
            f = inner(f, f)
    
>       actual = assemble(eval(expr)*dx)

tests/regression/test_zero_forms.py:82: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/adjoint_utils/assembly.py:30: in wrapper
    output = assemble(form, *args, **kwargs)
firedrake/assemble.py:133: in assemble
    return get_assembler(expr, *args, **kwargs).assemble(tensor=tensor)
firedrake/assemble.py:981: in assemble
    self.execute_parloops(tensor)
firedrake/assemble.py:1000: in execute_parloops
    for parloop in self.parloops(tensor):
firedrake/assemble.py:1011: in parloops
    self._parloops = tuple(parloop_builder.build(tensor) for parloop_builder in self.parloop_builders)
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1017: in parloop_builders
    for local_kernel, subdomain_id in self.local_kernels:
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1052: in local_kernels
    kernels = tsfc_interface.compile_form(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/tsfc_interface.py:220: in compile_form
    tsfc_kernel = TSFCKernel(
firedrake/tsfc_interface.py:95: in __init__
    tree = tsfc_compile_form(form, prefix=name, parameters=parameters,
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
../firedrake_venv/src/tsfc/tsfc/driver.py:74: in compile_form
    kernel = compile_integral(integral_data, fd, prefix, parameters, interface=interface, diagonal=diagonal, log=log)
../firedrake_venv/src/tsfc/tsfc/driver.py:128: in compile_integral
    builder.set_coefficients(integral_data, form_data)
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:345: in set_coefficients
    self._coefficient(coefficient, f"w_{k}")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38), VectorElement(FiniteElement('Real', quadrilateral, 0), dim=2)), 0)
name = 'w_0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'VectorElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError

Check failure on line 218 in tests/vertexonly/test_interpolation_from_parent.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_interpolation_from_parent.test_vector_function_interpolation[cube-mesh-1-coords-VectorFunctionSpace(CG2)] 

AttributeError: 'VectorElement' object has no attribute 'value_size'
Raw output 
self = Mesh(VectorElement(FiniteElement('Lagrange', tetrahedron, 1), dim=3), 145)
tolerance = 0.5

    def _c_locator(self, tolerance=None):
        from pyop2 import compilation
        from pyop2.utils import get_petsc_dir
        import firedrake.function as function
        import firedrake.pointquery_utils as pq_utils
    
        cache = self.__dict__.setdefault("_c_locator_cache", {})
        try:
>           return cache[tolerance]
E           KeyError: 0.5

firedrake/mesh.py:2651: KeyError

During handling of the above exception, another exception occurred:

parentmesh = Mesh(VectorElement(FiniteElement('Lagrange', tetrahedron, 1), dim=3), 145)
vertexcoords = array([[0.59762701, 0.93037873, 0.70552675]])
vfs = ('CG', 2, <cyfunction VectorFunctionSpace at 0x7fa067fe0860>)

    def test_vector_function_interpolation(parentmesh, vertexcoords, vfs):
        if parentmesh.name == "immersedsphere":
            vertexcoords = immersed_sphere_vertexcoords(parentmesh, vertexcoords)
        vfs_fam, vfs_deg, vfs_typ = vfs
>       vm = VertexOnlyMesh(parentmesh, vertexcoords, missing_points_behaviour=None)

tests/vertexonly/test_interpolation_from_parent.py:218: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/mesh.py:3364: in VertexOnlyMesh
    swarm, input_ordering_swarm, n_missing_points = _pic_swarm_in_mesh(
firedrake/mesh.py:3585: in _pic_swarm_in_mesh
    ) = _parent_mesh_embedding(
firedrake/mesh.py:4151: in _parent_mesh_embedding
    ) = parent_mesh.locate_cells_ref_coords_and_dists(coords_global, tolerance)
firedrake/mesh.py:2633: in locate_cells_ref_coords_and_dists
    self._c_locator(tolerance=tolerance)(self.coordinates._ctypes,
firedrake/mesh.py:2654: in _c_locator
    src = pq_utils.src_locate_cell(self, tolerance=tolerance)
firedrake/pointquery_utils.py:37: in src_locate_cell
    src.append(compile_coordinate_element(mesh.ufl_coordinate_element(), tolerance))
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:217: in compile_coordinate_element
    "to_reference_coords_newton_step": to_reference_coords_newton_step(ufl_coordinate_element, parameters),
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/pointquery_utils.py:147: in to_reference_coords_newton_step
    x0_expr = builder._coefficient(x0, "x0")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(FiniteElement('Lagrange', tetrahedron, 1), dim=3), 147), VectorElement(FiniteElement('Real', tetrahedron, 0), dim=3)), 170)
name = 'x0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'VectorElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError

Check failure on line 82 in tests/regression/test_zero_forms.py

See this annotation in the file changed.

@github-actions github-actions / Firedrake real

test_zero_forms.test_math_functions[True-tanh(f) + cos(f) + sin(f)--10-constant-tensor] 

AttributeError: 'TensorElement' object has no attribute 'value_size'
Raw output 
mesh = Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38)
expr = 'tanh(f) + cos(f) + sin(f)', value = -10, typ = 'constant'
fs_type = 'tensor'

    @pytest.mark.parametrize(['expr', 'value', 'typ', 'fs_type'],
                             itertools.product(['f',
                                                '2*f',
                                                'tanh(f)',
                                                '2 * tanh(f)',
                                                'f + tanh(f)',
                                                'cos(f) + sin(f)',
                                                'cos(f)*cos(f) + sin(f)*sin(f)',
                                                'tanh(f) + cos(f) + sin(f)',
                                                '1.0/tanh(f) + 1.0/f',
                                                'sqrt(f*f)',
                                                '1.0/tanh(sqrt(f*f)) + 1.0/f + sqrt(f*f)'],
                                               [1, 10, 20, -1, -10, -20],
                                               ['function', 'constant'],
                                               ['scalar', 'vector', 'tensor']))
    def test_math_functions(mesh, expr, value, typ, fs_type):
        if typ == 'function':
            family, degree = 'CG', 1
        elif typ == 'constant':
            family, degree = 'Real', 0
    
        if fs_type == "vector":
            V = VectorFunctionSpace(mesh, family, degree)
        elif fs_type == "tensor":
            V = TensorFunctionSpace(mesh, family, degree)
        else:
            V = FunctionSpace(mesh, family, degree)
        f = Function(V)
        f.assign(value)
        if fs_type == "vector":
            f = dot(f, f)
        elif fs_type == "tensor":
            f = inner(f, f)
    
>       actual = assemble(eval(expr)*dx)

tests/regression/test_zero_forms.py:82: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/adjoint_utils/assembly.py:30: in wrapper
    output = assemble(form, *args, **kwargs)
firedrake/assemble.py:133: in assemble
    return get_assembler(expr, *args, **kwargs).assemble(tensor=tensor)
firedrake/assemble.py:981: in assemble
    self.execute_parloops(tensor)
firedrake/assemble.py:1000: in execute_parloops
    for parloop in self.parloops(tensor):
firedrake/assemble.py:1011: in parloops
    self._parloops = tuple(parloop_builder.build(tensor) for parloop_builder in self.parloop_builders)
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1017: in parloop_builders
    for local_kernel, subdomain_id in self.local_kernels:
/usr/lib/python3.12/functools.py:995: in __get__
    val = self.func(instance)
firedrake/assemble.py:1052: in local_kernels
    kernels = tsfc_interface.compile_form(
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
firedrake/tsfc_interface.py:220: in compile_form
    tsfc_kernel = TSFCKernel(
firedrake/tsfc_interface.py:95: in __init__
    tree = tsfc_compile_form(form, prefix=name, parameters=parameters,
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
petsc4py/PETSc/Log.pyx:188: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
petsc4py/PETSc/Log.pyx:189: in petsc4py.PETSc.Log.EventDecorator.decorator.wrapped_func
    ???
../firedrake_venv/src/PyOP2/pyop2/caching.py:550: in wrapper
    value = func(*args, **kwargs)
../firedrake_venv/src/tsfc/tsfc/driver.py:74: in compile_form
    kernel = compile_integral(integral_data, fd, prefix, parameters, interface=interface, diagonal=diagonal, log=log)
../firedrake_venv/src/tsfc/tsfc/driver.py:128: in compile_integral
    builder.set_coefficients(integral_data, form_data)
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:345: in set_coefficients
    self._coefficient(coefficient, f"w_{k}")
../firedrake_venv/src/tsfc/tsfc/kernel_interface/firedrake_loopy.py:103: in _coefficient
    expr = prepare_coefficient(coefficient, name, interior_facet=self.interior_facet)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

coefficient = Coefficient(FunctionSpace(Mesh(VectorElement(FiniteElement('Q', quadrilateral, 1), dim=2), 38), TensorElement(FiniteElement('Real', quadrilateral, 0), shape=(2, 2), symmetry={})), 0)
name = 'w_0', interior_facet = False

    def prepare_coefficient(coefficient, name, interior_facet=False):
        """Bridges the kernel interface and the GEM abstraction for
        Coefficients.
    
        :arg coefficient: UFL Coefficient
        :arg name: unique name to refer to the Coefficient in the kernel
        :arg interior_facet: interior facet integral?
        :returns: (funarg, expression)
             expression - GEM expression referring to the Coefficient
                          values
        """
        assert isinstance(interior_facet, bool)
    
        if coefficient.ufl_element().family() == 'Real':
            # Constant
>           value_size = coefficient.ufl_element().value_size
E           AttributeError: 'TensorElement' object has no attribute 'value_size'

../firedrake_venv/src/tsfc/tsfc/kernel_interface/common.py:475: AttributeError
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