From e2b837eefd7c6929c77334581349689da5869495 Mon Sep 17 00:00:00 2001
From: Bo Li <bli25@berkeley.edu>
Date: Tue, 2 Feb 2016 15:38:38 -0800
Subject: [PATCH] Updated WHAT_IS_NEW

---
 WHAT_IS_NEW        | 6 ++++++
 rsem_perl_utils.pm | 2 +-
 2 files changed, 7 insertions(+), 1 deletion(-)

diff --git a/WHAT_IS_NEW b/WHAT_IS_NEW
index 1dacd7e..008fa9a 100644
--- a/WHAT_IS_NEW
+++ b/WHAT_IS_NEW
@@ -1,3 +1,9 @@
+RSEM v1.2.28
+
+- Fixed a bug in RSEM v1.2.27 that can lead to assertion errors for parsing GTF files
+
+--------------------------------------------------------------------------------------------
+
 RSEM v1.2.27
 
 - Upgraded SAMtools to v1.3; RSEM now supports input alignments in SAM/BAM/CRAM format
diff --git a/rsem_perl_utils.pm b/rsem_perl_utils.pm
index 11c2e09..c53bf42 100644
--- a/rsem_perl_utils.pm
+++ b/rsem_perl_utils.pm
@@ -9,7 +9,7 @@ our @ISA = qw(Exporter);
 our @EXPORT = qw(runCommand);
 our @EXPORT_OK = qw(runCommand collectResults showVersionInfo getSAMTOOLS);
 
-my $version = "RSEM v1.2.27"; # Update version info here
+my $version = "RSEM v1.2.28"; # Update version info here
 my $samtools = "samtools-1.3"; # If update to another version of SAMtools, need to change this
 
 # command, {err_msg}