From 5b4eb67a8469cb4807e4b128dbd11ff22d928880 Mon Sep 17 00:00:00 2001 From: Nick Croucher Date: Tue, 8 Oct 2024 12:30:06 +0100 Subject: [PATCH] Update argument name --- PopPUNK/network.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/PopPUNK/network.py b/PopPUNK/network.py index 8df43e9b..2568e934 100644 --- a/PopPUNK/network.py +++ b/PopPUNK/network.py @@ -1890,7 +1890,7 @@ def sparse_mat_to_network(sparse_mat, rlist, use_gpu = False): return G -def prune_graph(prefix, reflist, passed, output_db_name, threads, use_gpu): +def prune_graph(prefix, reflist, samples_to_keep, output_db_name, threads, use_gpu): """Keep only the specified sequences in a graph Args: