diff --git a/config/config_parser.py b/config/config_parser.py index d1e4684..763476b 100644 --- a/config/config_parser.py +++ b/config/config_parser.py @@ -15,7 +15,7 @@ def parse_config(filename, section='postgresql'): for param in params: configs[param[0]] = param[1] else: - raise Exception('Section {0} not found in the {1} file'.format(section, filename)) + print('Section {0} not found in the {1} file'.format(section, filename)) return configs diff --git a/setup.py b/setup.py index b7e233b..1773f73 100644 --- a/setup.py +++ b/setup.py @@ -24,12 +24,13 @@ def get_version(rel_path): setup( name="xi-mzidentml-converter", - version="0.2.2", + version="0.2.4", description="xi-mzidentml-converter uses pyteomics (https://pyteomics.readthedocs.io/en/latest/index.html) to " "parse mzIdentML files (v1.2.0) and extract crosslink information. Results are written to a " "relational database (PostgreSQL or SQLite) using sqlalchemy.", long_description_content_type="text/markdown", long_description=long_description, + author="Colin Combe, Lars Kolbowski, Suresh Hewapathirana", license="'Apache 2.0", url="https://github.com/PRIDE-Archive/xi-mzidentml-converter", packages=find_packages(), @@ -39,7 +40,7 @@ def get_version(rel_path): 'numpy>=1.14.3', 'pandas>=0.21.0', 'pymzml>=0.7.8', - 'pyteomics>=4.7.2', + 'pyteomics>=4.7.3', 'requests>=2.31.0', 'urllib3>=1.24.2', 'pytest',