From 08ee2c6585b5808229d8df24cb3e87f6b6c5dc5e Mon Sep 17 00:00:00 2001
From: sureshhewa <sureshhewabi@gmail.com>
Date: Wed, 6 Dec 2023 10:16:03 +0000
Subject: [PATCH] change uniprot batch size

---
 .kubernetes.yml     | 1 -
 app/routes/pride.py | 2 +-
 2 files changed, 1 insertion(+), 2 deletions(-)

diff --git a/.kubernetes.yml b/.kubernetes.yml
index ed5a032..b58a515 100644
--- a/.kubernetes.yml
+++ b/.kubernetes.yml
@@ -81,4 +81,3 @@ spec:
       protocol: TCP
       targetPort: http
   type: ClusterIP
-#  type: NodePort
diff --git a/app/routes/pride.py b/app/routes/pride.py
index cc02e31..00bc156 100644
--- a/app/routes/pride.py
+++ b/app/routes/pride.py
@@ -645,7 +645,7 @@ async def update_protein_metadata(list_of_project_sub_details):
 
 async def find_uniprot_data(list_of_project_sub_details):
     i = 1
-    batch_size = 10
+    batch_size = 4
     base_in_URL = "https://rest.uniprot.org/uniprotkb/search?query=accession:"
     fields_in_URL = "&fields=protein_name,gene_primary&size=50"
     seperator = "%20OR%20"