Dockerfile issue

[ManuelDelpero]

Hi everyone, I am trying to build docker image for multiplatform since I am having this issue: the requested image's platform (linux/arm64/v8) does not match the detected host platform (linux/amd64). However the latest available Dockerfile has some issues when I run docker build or docker buildx. Could you please provide correct latest Dockerfile or image for multiplatform?

[afonsoguerra]

Hi Manuel,
Thanks for raising this. At the moment we are only running on amd64/x86 architecture, I will label this as a future enhancement where we can explore running it on ARM64.

[ManuelDelpero]

Hi Afonso,

Thank you very much for your reply.
I would also like to ask updates regarding .db files for clinVAR and the other resources. ClinVAR at the moment is only providing xml files. Could you please spcify how the .db files were generated?

Please feel free to delete this question since it is not relevant. I just did not want to open another issue but could not find email adress to contact you directly.

[IsmailM]

Hi @ManuelDelpero,

We are currently working on updating this entire pipeline - we hope to eventually release the scripts for generating the database.

Secondly, would you mind sharing the issues with building the docker image?

(I will also look into whether we can update the latest version on Github Actions).

[ManuelDelpero]

Hi Ismail,

Thanks for your answer and work you are putting into this.
I think the problem with the docker file is that it was modified to deal with the python scripts but I can still see it is calling the old perl script:
COPY GenomeChronicler_mainDruid.pl /GenomeChronicler/

[IsmailM]

Hi Manuel,

Apologies - we seem to have missed that in the last update.

I have fixed this, and this will be merged once one of my colleagues has checked it.