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setup.cfg
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[metadata]
name = neuroglancer-scripts
version = attr: neuroglancer_scripts.__version__
author = Yann Leprince
author_email = [email protected]
description = Conversion of images to the Neuroglancer pre-computed format
long_description = file: README.rst
long_description_content_type = text/x-rst
url = https://github.com/HumanBrainProject/neuroglancer-scripts
classifiers =
Development Status :: 5 - Production/Stable
Environment :: Console
Intended Audience :: Science/Research
License :: OSI Approved :: MIT License
Programming Language :: Python :: 3
Programming Language :: Python :: 3.6
Programming Language :: Python :: 3.7
Programming Language :: Python :: 3.8
Programming Language :: Python :: 3.9
Programming Language :: Python :: 3.10
Programming Language :: Python :: 3.11
Programming Language :: Python :: 3.12
Topic :: Scientific/Engineering :: Medical Science Apps.
Topic :: Scientific/Engineering :: Visualization
keywords = neuroimaging
[options]
package_dir =
= src
packages = find:
python_requires = ~=3.6
install_requires =
nibabel >= 2
numpy >= 1.17
pillow >= 1.1.6
requests >= 2
scikit-image # TODO use pillow instead
tqdm ~= 4.29
imagecodecs # required to read LZW compressed tiff files
[options.packages.find]
where = src
[options.extras_require]
# Remember to keep test dependencies synchronized with the list of dependencies
# in tox.ini (at the moment: pytest, requests-mock)
dev =
pytest
requests-mock
check-manifest
pep8-naming
pre-commit
pytest-cov
readme_renderer
ruff
sphinx
tox
docs =
sphinx
[options.entry_points]
console_scripts =
compute-scales = neuroglancer_scripts.scripts.compute_scales:main
convert-chunks = neuroglancer_scripts.scripts.convert_chunks:main
generate-scales-info = neuroglancer_scripts.scripts.generate_scales_info:main
link-mesh-fragments = neuroglancer_scripts.scripts.link_mesh_fragments:main
mesh-to-precomputed = neuroglancer_scripts.scripts.mesh_to_precomputed:main
scale-stats = neuroglancer_scripts.scripts.scale_stats:main
slices-to-precomputed = neuroglancer_scripts.scripts.slices_to_precomputed:main
volume-to-precomputed = neuroglancer_scripts.scripts.volume_to_precomputed:main
volume-to-precomputed-pyramid = neuroglancer_scripts.scripts.volume_to_precomputed_pyramid:main