From d68658efb0c2f2865675c9385e5dd14a27fdde08 Mon Sep 17 00:00:00 2001 From: remomomo Date: Wed, 27 Jul 2022 09:30:54 +0200 Subject: [PATCH] Update README.md --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index ade830f..60b7346 100644 --- a/README.md +++ b/README.md @@ -1,7 +1,7 @@ # Functional Annotation and Association Testing Pipeline Pipeline to run variant effect prediction and rare-variant association tests for continuous phenotypes on UK Biobank exome sequencing (or other) data. It uses [Snakemake](https://snakemake.github.io/) to parallelize large parts of the analysis across chromosomes and phenotypes. Conda on a Linux system is the main requirement for getting started. -This pipeline was originally run on different virtual machines in local mode. For full cluster support, users can easily modify `./run.sh` to use SLURM, SGE or other schedulers with Snakemake. +This pipeline was originally run on different virtual machines in local mode. A snakemake profile for slurm is provided at `./slurm`. ## Getting Started ### Installing basic dependencies