diff --git a/_sources/installing/index.rst.txt b/_sources/installing/index.rst.txt index fa45725..0630008 100644 --- a/_sources/installing/index.rst.txt +++ b/_sources/installing/index.rst.txt @@ -120,6 +120,7 @@ GTDB-Tk reference data GTDB-Tk requires ~110G of external data that needs to be downloaded and unarchived: For full package: +^^^^^^^^^^^^^^^^^ .. code-block:: bash @@ -128,6 +129,7 @@ For full package: tar xvzf gtdbtk_data.tar.gz For split package: +^^^^^^^^^^^^^^^^^^ To create an archive from the GTDB-Tk release data parts: diff --git a/installing/index.html b/installing/index.html index 6e09718..7e537cf 100644 --- a/installing/index.html +++ b/installing/index.html @@ -127,7 +127,11 @@
  • Hardware requirements
  • Python libraries
  • Third-party software
  • -
  • GTDB-Tk reference data
  • +
  • GTDB-Tk reference data +
  • FAQ
  • @@ -369,13 +373,16 @@

    Python libraries

    GTDB-Tk reference data

    GTDB-Tk requires ~110G of external data that needs to be downloaded and unarchived:

    -

    For full package:

    +
    +

    For full package:

    wget https://data.ace.uq.edu.au/public/gtdb/data/releases/latest/auxillary_files/gtdbtk_package/full_package/gtdbtk_data.tar.gz
     wget https://data.gtdb.ecogenomic.org/releases/latest/auxillary_files/gtdbtk_package/full_package/gtdbtk_data.tar.gz ( mirror for Australia)
     tar xvzf gtdbtk_data.tar.gz
     
    -

    For split package:

    +
    +
    +

    For split package:

    To create an archive from the GTDB-Tk release data parts:

    1. Ensure all parts of the GTDB-Tk release data are in the same directory.

    2. @@ -459,6 +466,7 @@

      Python libraries