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refactor rbhtfinder #107

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ggutierrez-sunbright opened this issue Apr 25, 2024 · 0 comments · May be fixed by #126
Open

refactor rbhtfinder #107

ggutierrez-sunbright opened this issue Apr 25, 2024 · 0 comments · May be fixed by #126
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rdock-utils upgrade a design modification, refactor, or component replacement

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@ggutierrez-sunbright
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Thanks to @simonbray, we have a python3 version of rbhtfinder
we need to refactor and modify the script so it adheres to the coding standards and general design of rdock-utils, add tests for it, and make it available for execution after installing the rdock-utils pacakge.

the fixtures provided by @simonbray are for this invocation arguments:
rbhtfinder -i rbhtfinder_input.txt -o rbhtfinder_output.txt -t rbhtfinder_threshold.txt -f column=4,steps=3,min=-10.0,max=0.0,interval=5.0 -f column=6,steps=5,min=1.0,max=5.0,interval=5.0 --max-time 1 --min-perc 1.0 -v 5 --header

@ggutierrez-sunbright ggutierrez-sunbright added rdock-utils upgrade a design modification, refactor, or component replacement labels Apr 25, 2024
@lpardey lpardey linked a pull request Jul 25, 2024 that will close this issue
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Labels
rdock-utils upgrade a design modification, refactor, or component replacement
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