We read every piece of feedback, and take your input very seriously.
To see all available qualifiers, see our documentation.
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
The new raw-based Factors are great!
However, the droplevels method produces a warning. Here's an example using the man page for Factor:
droplevels
library(IRanges) set.seed(123) ir0 <- IRanges(sample(5, 8, replace=TRUE), width=10, names=letters[1:8], ID=paste0("ID", 1:8)) ## Use explicit levels: ir1 <- IRanges(1:6, width=10) F1 <- Factor(ir0, levels=ir1) droplevels(F1)
Gives the warning:
Warning message: In storage.mode(index) <- "raw" : out-of-range values treated as 0 in coercion to raw
Session info for reference:
R version 4.4.1 (2024-06-14) Platform: aarch64-apple-darwin20 Running under: macOS Sonoma 14.5 Matrix products: default BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib LAPACK: /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/lib/libRlapack.dylib; LAPACK version 3.12.0 locale: [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 time zone: Europe/Copenhagen tzcode source: internal attached base packages: [1] stats4 stats graphics grDevices utils datasets methods base other attached packages: [1] IRanges_2.38.1 S4Vectors_0.42.1 BiocGenerics_0.50.0 loaded via a namespace (and not attached): [1] BiocManager_1.30.23 compiler_4.4.1 cli_3.6.3 tools_4.4.1 [5] rstudioapi_0.16.0 pkgload_1.4.0 rlang_1.1.4
The text was updated successfully, but these errors were encountered:
No branches or pull requests
The new raw-based Factors are great!
However, the
droplevels
method produces a warning. Here's an example using the man page for Factor:Gives the warning:
Session info for reference:
The text was updated successfully, but these errors were encountered: